Analytics
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Discuss discrepancies between AdWords and Google Analytics data, linking AdWords and Google Analytics, importing your goals/Ecommerce transactions into AdWords, and setting up Remarketing
 
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Not all campaigns tracking to Analytics

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I'm running several AdWords campaigns (auto-tracking) and some custom tracking from a display campaign. For yesterday, AdWords shows 143 clicks, but I only see 25 (over several campaigns) in Analytics.
Also, my custom tracking works when I test it, but I am not getting any traffic from the ads themselves - not shortened URLs.

This seems to have been happening for about 10 days now. Never had issues before.

Any idea why this would be happening / how to fix it?